PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62025838-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 452aa    MW: 52745.1 Da    PI: 6.9983
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62025838-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.87.3e-0810524890
            FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                    ++++ r+ a tr +Cka+++ k +++g++ev   + +HnHel+
  AUR62025838-RA 10 KTRKPRQVAITRSNCKACIRAKVNTEGQFEVVAHVIQHNHELT 52
                    4677889999*******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MVDEEDVNVK TRKPRQVAIT RSNCKACIRA KVNTEGQFEV VAHVIQHNHE LTKPQWHYLH  60
RSERKMTEEK AEAIKIIKSS GLTTMDTYNY MATEAGGEQN VGHSVVDHLN FCSRLRMEQI  120
EAGDAQTLVN ILSQEQSEDP NFFFRVKFDK EGRICNIFWR DSMMLEDYRI YGDVLVFDTT  180
YITNRYNLIC APFVGINNHW HNCMFACAFI GDEMTDSFVW LLQTFIKAME DRKPTSIFTD  240
QDQAMANAIL EVIPNTRHRL CIWHLEQNAI TRFGALKKDK EFKFAFNQCL KMCVTEQEFE  300
AKWQAMLQKY EFTKHSWYKR VYELKDKWCP SLSRDFFSAG ILSSQRSEST NHAIGFRASK  360
ATTLTEFYTI FKKTTNRWRS TEKYDEFTCS KSIAFTSLPL SGMLKHVAQV FTLSLFRDFK  420
EEFEYSMATT VQMLGSNEEC LLYQVTLEDK P*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-79FAR1 family protein