PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62025652-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LBD
Protein Properties Length: 121aa    MW: 13921.7 Da    PI: 4.8896
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62025652-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260483.6e-153594298
          DUF260 42 vlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98
                    vl l+++lpee+r++a++s+v eA+ r+rdPvyG+vg+i++l+qq+++++ ela+++
  AUR62025652-RA  3 VLMLMQQLPEERRSEAAESMVLEARSRVRDPVYGSVGTITQLRQQIMEAEYELAKTQ 59
                    56789************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MIVLMLMQQL PEERRSEAAE SMVLEARSRV RDPVYGSVGT ITQLRQQIME AEYELAKTQG  60
LIALLSHAQN LHEQQQKFEA ENKLPLISQN QDNLHFDHSL LLNDLNQQQQ SKNYISWGFE  120
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26660.11e-18LBD family protein