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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62025525-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 27789.7 Da PI: 5.0671 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.7 | 7.7e-20 | 71 | 120 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp+ + r++lg+f t+eeAa+a+++ ++k++g AUR62025525-RA 71 EYRGIRQRP-WGKWAAEIRDPR----NgVRVWLGTFNTPEEAARAYDKEARKIRG 120 59*******.**********85....34*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MCGGAILADL IPRNQGRFIS GSDFWPNDFI STSSDNFTKQ VSYPPPKRSL SSSSGSNARQ 60 EKRPKKQRKT EYRGIRQRPW GKWAAEIRDP RNGVRVWLGT FNTPEEAARA YDKEARKIRG 120 KKAKVNFPNE DEQHCTNNIQ QFSSNGLESS IEKSTGYGLE SAYNAPNSDG VVPVPKAETA 180 VVEEEENEVQ KLSEELMAYE NYMKFYEIPY LDGQSATVQP SLGGCLEGNA TLELWNFDDD 240 ATVLSAAST* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 2e-39 | ERF family protein |