PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024885-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

CPP

Protein Properties

Length: 848aa MW: 91873.5 Da PI: 7.2121

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024885-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	24.3	6.2e-08	461	487	15	41
TCR 15 kkYCeCfaagkkCseeCkCedCkNkee 41 + YC+Cfaag +C+e+C C +C+N+ e AUR62024885-RA 461 QFYCDCFAAGFYCGESCACVGCFNRPE 487 57**********************876 PP
2	TCR	50.2	5.3e-16	535	572	1	38
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38 ++k+gCnCkks ClkkYCeC++a++ Cse C+Ce+CkN AUR62024885-RA 535 RHKRGCNCKKSMCLKKYCECYQANVGCSEGCRCEGCKN 572 589**********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 848 aa Download sequence
MDTPESKSTP ANTRKIKLIN PSPSDSSAFQ DSPVFNYLSN LSPIQPVKGG PVAQGFPGLA 60 SPPLKVSEIL IAFRKLQSSG PNSECSQDHD HDHDNCHKNG RDLGGSVKIE PEFHNRLAYG 120 DQKNCNTEKL APDAHCSPSG CLDEFLTDPG NCANSSQKLQ SDNAQPSLES GCLEKIDVGN 180 GKALGLNGSA LQKGKRISQA KSRISVRLVK NEPRHVISSS ECSGASSSLL TDHTSEKCQT 240 GDSFNEASHF ERGTLRRCLF DESQRINSVD GPGFWNPISS AQIQESVNMS TGKLGSEQMN 300 NFSKPAVDTC VSSVTDSHAV AVSKPLGIGL HLNSVVYPRS TDSAFTNQQS SVMRVERKKL 360 LFLTSNQSDG KVDASNVTGK VLISSEEIDR HQACSLPSSD NTTASEAIEQ SNNAIETKLH 420 AASTIINEKI TLSSDLVENF ESSLGSPNTK RQALNLCLTS QFYCDCFAAG FYCGESCACV 480 GCFNRPEYED TVLETRQQIE SRNPLAFAPK VLQTVTASPT SSKVVSNLST PSSARHKRGC 540 NCKKSMCLKK YCECYQANVG CSEGCRCEGC KNIYGIREDY NIAREIMLKR ASVEMSEGTM 600 TVNNSFVSSR VHSSPNLTPI TPALQCSDQK KNALKSRLPF RKFLHPPESH TDTLTSEENP 660 ASPSNSQNHG ELLEKNKCTD VGVHDAEKGP ENTEDRLVLA GDDESVNAHC SSQLAKPDVK 720 NSILRNISQP ESFAESGPLA PSSSLRWRSS PITPITQLAT SELKEFGTGS KQSDIFEDDT 780 PEILKQSPTP IKSVKLSSPN KKRISPPHNH INSSEAVKCS RKFVLRAVPS FPPLTPYSKN 840 SNLDNRG*

Sequence ? help Back to Top

Protein Sequence Length: 848 aa Download sequence

MDTPESKSTP ANTRKIKLIN PSPSDSSAFQ DSPVFNYLSN LSPIQPVKGG PVAQGFPGLA  60
SPPLKVSEIL IAFRKLQSSG PNSECSQDHD HDHDNCHKNG RDLGGSVKIE PEFHNRLAYG  120
DQKNCNTEKL APDAHCSPSG CLDEFLTDPG NCANSSQKLQ SDNAQPSLES GCLEKIDVGN  180
GKALGLNGSA LQKGKRISQA KSRISVRLVK NEPRHVISSS ECSGASSSLL TDHTSEKCQT  240
GDSFNEASHF ERGTLRRCLF DESQRINSVD GPGFWNPISS AQIQESVNMS TGKLGSEQMN  300
NFSKPAVDTC VSSVTDSHAV AVSKPLGIGL HLNSVVYPRS TDSAFTNQQS SVMRVERKKL  360
LFLTSNQSDG KVDASNVTGK VLISSEEIDR HQACSLPSSD NTTASEAIEQ SNNAIETKLH  420
AASTIINEKI TLSSDLVENF ESSLGSPNTK RQALNLCLTS QFYCDCFAAG FYCGESCACV  480
GCFNRPEYED TVLETRQQIE SRNPLAFAPK VLQTVTASPT SSKVVSNLST PSSARHKRGC  540
NCKKSMCLKK YCECYQANVG CSEGCRCEGC KNIYGIREDY NIAREIMLKR ASVEMSEGTM  600
TVNNSFVSSR VHSSPNLTPI TPALQCSDQK KNALKSRLPF RKFLHPPESH TDTLTSEENP  660
ASPSNSQNHG ELLEKNKCTD VGVHDAEKGP ENTEDRLVLA GDDESVNAHC SSQLAKPDVK  720
NSILRNISQP ESFAESGPLA PSSSLRWRSS PITPITQLAT SELKEFGTGS KQSDIFEDDT  780
PEILKQSPTP IKSVKLSSPN KKRISPPHNH INSSEAVKCS RKFVLRAVPS FPPLTPYSKN  840
SNLDNRG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	4e-47	CPP family protein