PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024316-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 466aa MW: 52193.4 Da PI: 6.6031

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024316-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.4	1.2e-31	250	304	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+eLHe+Fve+v++LGG++kAtPk+il+lm+ +gLt+ hvkSHLQkYR+ AUR62024316-RA 250 KTRIRWTTELHEKFVECVSRLGGADKATPKAILKLMNSDGLTIFHVKSHLQKYRI 304 68****************************************************7 PP
2	Myb_DNA-binding	51.5	2.3e-16	254	303	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWTte++e++v++v +lGg t+k+I + m+ g+t ++ks++qky+ AUR62024316-RA 254 RWTTELHEKFVECVSRLGGAdkaTPKAILKLMNsDGLTIFHVKSHLQKYR 303 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MSNQKIDYRE QVQQTNGVIN DCMIEIGSRD SQFISVRQPW NMGSCMGGGG VESQPQNILP 60 ANLSSTVISR FGSPVPDFST AERYGSLPYA HQISSPTFSS QCSKNYDLEY RSFPCSTEGF 120 SAQLAEQDAN ELQSRTTLET AAKSLLYGDQ SQFYASGKTY ASPCGNFQES EHIQQLKNKL 180 LVDYANSDGR NYIFPINEKQ DFRILDKSYE SPHGHFSFSS QGEKQVLRPL GVLPLNSGNS 240 FSSGAAISSK TRIRWTTELH EKFVECVSRL GGADKATPKA ILKLMNSDGL TIFHVKSHLQ 300 KYRIAKYMPD STEGKSGRSG SSLNDVTQID IKDGVQLKEA LSLQLDVQRR LHEQLEIQRN 360 LQLRIEEQGR QLKMMFDQQQ KTRQTLLGDQ NSDNMSPNGP TFSLDDVQVS SEEGLRAMHI 420 AAKGRSYDFQ IEWIQMLWRW KSWGRATYDQ SGDDGMLCTV LLSVA*

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MSNQKIDYRE QVQQTNGVIN DCMIEIGSRD SQFISVRQPW NMGSCMGGGG VESQPQNILP  60
ANLSSTVISR FGSPVPDFST AERYGSLPYA HQISSPTFSS QCSKNYDLEY RSFPCSTEGF  120
SAQLAEQDAN ELQSRTTLET AAKSLLYGDQ SQFYASGKTY ASPCGNFQES EHIQQLKNKL  180
LVDYANSDGR NYIFPINEKQ DFRILDKSYE SPHGHFSFSS QGEKQVLRPL GVLPLNSGNS  240
FSSGAAISSK TRIRWTTELH EKFVECVSRL GGADKATPKA ILKLMNSDGL TIFHVKSHLQ  300
KYRIAKYMPD STEGKSGRSG SSLNDVTQID IKDGVQLKEA LSLQLDVQRR LHEQLEIQRN  360
LQLRIEEQGR QLKMMFDQQQ KTRQTLLGDQ NSDNMSPNGP TFSLDDVQVS SEEGLRAMHI  420
AAKGRSYDFQ IEWIQMLWRW KSWGRATYDQ SGDDGMLCTV LLSVA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	5e-70	G2-like family protein