PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024311-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 518aa MW: 57620.5 Da PI: 10.3508

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024311-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.2e-09	27	59	3	36
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS- CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRt 36 +W t+E++ll++av+++G + W++++r++ +Rt AUR62024311-RA 27 SWGTQEELLLACAVQRHGIDAWDSVSRELH-NRT 59 7***************************.9 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MAEPSTSQIQ TTTTATAATS TVTPPSSWGT QEELLLACAV QRHGIDAWDS VSRELHNRTS 60 FSHFTPLVCQ QKYRDLKRRF ASDVAGDIAA DDAGLWLEEL RRLRVAELRR DLQRYDLSIV 120 SLQLKVKKLK EERESDVKEE IKEERENISD PKKIEERETE INERGKKIGV FSGNSSGEEN 180 QSPAVKSSGE GKSRTLAEFL DVVRARKLGS FFERRLESQE TPKYTNLIKQ HIDLETIQRR 240 LEEGQYSDCQ TKFYRDLMLL INNAIVFFTK RSSEHKAALE LRQLLNKQFQ SQLSSPHDHK 300 SRPSKPVQPA PLPKPTKPEA NQADLKQPNL TVNGLVIACR KRSSIAGKSS RGVSEKREPA 360 GPAPATPPDE KAPIGEMVKQ QREKASSTSF NTVTKKRTRD QSFGSRSSSS KNNSNPNPNT 420 PISSKTESSE AKADKKKPSP GNSSNKIKQV SGSASGKTLF LQSLKNSDKR KNGNGGSSSS 480 VKSDRRKDEG PQNGSVDHLR GQQQSQLWVR EAEMVAV*

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MAEPSTSQIQ TTTTATAATS TVTPPSSWGT QEELLLACAV QRHGIDAWDS VSRELHNRTS  60
FSHFTPLVCQ QKYRDLKRRF ASDVAGDIAA DDAGLWLEEL RRLRVAELRR DLQRYDLSIV  120
SLQLKVKKLK EERESDVKEE IKEERENISD PKKIEERETE INERGKKIGV FSGNSSGEEN  180
QSPAVKSSGE GKSRTLAEFL DVVRARKLGS FFERRLESQE TPKYTNLIKQ HIDLETIQRR  240
LEEGQYSDCQ TKFYRDLMLL INNAIVFFTK RSSEHKAALE LRQLLNKQFQ SQLSSPHDHK  300
SRPSKPVQPA PLPKPTKPEA NQADLKQPNL TVNGLVIACR KRSSIAGKSS RGVSEKREPA  360
GPAPATPPDE KAPIGEMVKQ QREKASSTSF NTVTKKRTRD QSFGSRSSSS KNNSNPNPNT  420
PISSKTESSE AKADKKKPSP GNSSNKIKQV SGSASGKTLF LQSLKNSDKR KNGNGGSSSS  480
VKSDRRKDEG PQNGSVDHLR GQQQSQLWVR EAEMVAV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	6e-32	MYB_related family protein