PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62023917-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ZF-HD
Protein Properties Length: 99aa    MW: 10725 Da    PI: 8.2143
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62023917-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.61.1e-312783360
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                    +vrY eC+kNhAa++Gg+a+DGC+Efm+s g+egt  al CaACgCHR+FHR++v++e
  AUR62023917-RA 27 SVRYMECQKNHAANIGGYALDGCREFMAS-GDEGTNLALVCAACGCHRSFHRQDVQTE 83
                    69**************************9.9999*******************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MRKRQVVIKR VVEDSRNSTN SAVAYRSVRY MECQKNHAAN IGGYALDGCR EFMASGDEGT  60
NLALVCAACG CHRSFHRQDV QTEVATESSS SLYSSIGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.11e-33ZF-HD family protein