PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62023657-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 625aa MW: 70725.1 Da PI: 9.4315

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62023657-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	43.4	1.1e-13	181	279	1	90
FAR1 1 kfYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 ++Y++Y+++ GF v+ +++ ++ + ++C ++g ++ +k+ ++ +++r++++++C +l + ++dg+w+++k+++eHn AUR62023657-RA 181 NYYRTYGEQEGFGVVCIGGRNNdvYNKAAYSGYVWKCECYGITTYKKRVngkrvvvYDEPSKKRKSKKCECPVMLYGQGHSDGVWKIMKVVNEHN 275 69********99865444443367777888999*****999888999999888899******************************* PP FAR1 87 Hela 90 H+++ AUR62023657-RA 276 HTMN 279 *997 PP

Sequence ? help Back to Top
Protein Sequence Length: 625 aa Download sequence
MWRPKGTLEV IDLGKDVYLF RFSIPDDYEK AILEGPWFII DHYLMITKWK PNFRPSMNPF 60 DRMIVWIRFP ELPVEYYDKE ALFDIAKLAG NPLRVDYATD HLTRARYARV FLDIDLSIPL 120 VTNVWVGNGW QSIDFPRDVG ELNNDCGHNL HNSGSSRCIG AAALPHPEVR MEFSSWDDMN 180 NYYRTYGEQE GFGVVCIGGR NNDVYNKAAY SGYVWKCECY GITTYKKRVN GKRVVVYDEP 240 SKKRKSKKCE CPVMLYGQGH SDGVWKIMKV VNEHNHTMNP ELSRHIAMYR KQKITKHLEQ 300 RIETDHASGA SKVYTDAKFV EVQNQYNRVA YLTLVLKKLL SQNEVEHIIK VLDMSGVTEV 360 PSMYVVDRWR KDISRKHTLV KVAYHDASKT KEASSSGEER PPNGEMVPQA PKTVTPKTPS 420 SVNKGSVVGS TDTPNSSTCV KDPEPRGNNK KGRPRTTRYT SPAEKAMTKV PKTGGKKKQG 480 KGHDNEVQYG QVNPHPPEFM QQQVGFPNVL PSRHHIGNMF PNSQVNNQGY FAGDPLVFTG 540 SGSVPSPPFN RRVLASGIHM SQHSEAVGYF TANNAYGEVQ FGDGIHFINP AHVPNTTIQN 600 PYSHTLMQNP NPHLRNLHPH PSFS*

Sequence ? help Back to Top

Protein Sequence Length: 625 aa Download sequence

MWRPKGTLEV IDLGKDVYLF RFSIPDDYEK AILEGPWFII DHYLMITKWK PNFRPSMNPF  60
DRMIVWIRFP ELPVEYYDKE ALFDIAKLAG NPLRVDYATD HLTRARYARV FLDIDLSIPL  120
VTNVWVGNGW QSIDFPRDVG ELNNDCGHNL HNSGSSRCIG AAALPHPEVR MEFSSWDDMN  180
NYYRTYGEQE GFGVVCIGGR NNDVYNKAAY SGYVWKCECY GITTYKKRVN GKRVVVYDEP  240
SKKRKSKKCE CPVMLYGQGH SDGVWKIMKV VNEHNHTMNP ELSRHIAMYR KQKITKHLEQ  300
RIETDHASGA SKVYTDAKFV EVQNQYNRVA YLTLVLKKLL SQNEVEHIIK VLDMSGVTEV  360
PSMYVVDRWR KDISRKHTLV KVAYHDASKT KEASSSGEER PPNGEMVPQA PKTVTPKTPS  420
SVNKGSVVGS TDTPNSSTCV KDPEPRGNNK KGRPRTTRYT SPAEKAMTKV PKTGGKKKQG  480
KGHDNEVQYG QVNPHPPEFM QQQVGFPNVL PSRHHIGNMF PNSQVNNQGY FAGDPLVFTG  540
SGSVPSPPFN RRVLASGIHM SQHSEAVGYF TANNAYGEVQ FGDGIHFINP AHVPNTTIQN  600
PYSHTLMQNP NPHLRNLHPH PSFS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	245	KKRVNGKRVVVYDEPSKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	4e-08	FAR1 family protein