PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62023607-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 886aa MW: 100546 Da PI: 5.3919

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62023607-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33	1.4e-10	34	77	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l AUR62023607-RA 34 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 77 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 886 aa Download sequence
MGRINGLEFL LFRKSAKQCK ARWYEWLDPS IKKTEWTREE DEKLLHLAKL MPTQWRTIAP 60 IVGRTPSQCL ERYEKLLDAA CTKDDNYEPG DDPRKLRPGE IDPNPESKPA RPDPVDMDED 120 EKGMLSEARA RLANTRGKKA KRKAREKQLE EARRLASLQK RRELKAAGID IRQRKRKRKG 180 IDYNAEIPFE KRPPPGFYDV VEEERPVEQP KFPTTIDELE GERRVDREAR LRKQDIAKNK 240 IAERQDAPGA IMQANKLNDP GTVRKRSKLM LPPPQISDQE LEEIARMGYA TDLLAGNQEL 300 ADGSGATHAL LANYSQTPRQ GMTPMRTPQR TPAGKGDAIM MEAENLARLR ESQTPLLGGD 360 NPDLHPSDFS GITPKKRDVQ TPNPMLTPSA TPGGTSLTPR IGMTPSRDVN SFSMTPKGTP 420 IRDKLRINEE MDMHDSAKLE LRRQAELKRN LRMGLSGLPE PKNEYEVVVR PEPEDSEDPE 480 EKIEEDMSDR LAREKAAEEA RLQTLLRKRS KVLQRELPRP PSAYVGLIKN SLMRAGEDKS 540 SFVPPTDIEQ ADEMVRKELL SLLEHDNAKY PLSEKEQKKA HKRSANTVPV IEDFEVDELY 600 EAGSFIEEEV QYLCVAMGHQ EETLDDFVEA HKSCLNDLMY FPTRNAYGLS SVAGTVEKLA 660 ALQNEFENVK KKMDDDNKKA QRLEKKIDVL THGYKMRADK LKTQIELTFK QMNTAGTELD 720 CFLALQRQEN MAASFRIKGL WEEVQKQKEV EKTLQKRYGD RVAELERIRQ LMDQFRKVEE 780 IEAKKHSEEL AQKAANQASL MSYETPEPGS EAAKEHDTDH PVGEALENNG FVNGEPVSIS 840 KLETQGIDGE LSNQINEADG NKLMMDGDVG EPVERVEDDA SNNQV*

Sequence ? help Back to Top

Protein Sequence Length: 886 aa Download sequence

MGRINGLEFL LFRKSAKQCK ARWYEWLDPS IKKTEWTREE DEKLLHLAKL MPTQWRTIAP  60
IVGRTPSQCL ERYEKLLDAA CTKDDNYEPG DDPRKLRPGE IDPNPESKPA RPDPVDMDED  120
EKGMLSEARA RLANTRGKKA KRKAREKQLE EARRLASLQK RRELKAAGID IRQRKRKRKG  180
IDYNAEIPFE KRPPPGFYDV VEEERPVEQP KFPTTIDELE GERRVDREAR LRKQDIAKNK  240
IAERQDAPGA IMQANKLNDP GTVRKRSKLM LPPPQISDQE LEEIARMGYA TDLLAGNQEL  300
ADGSGATHAL LANYSQTPRQ GMTPMRTPQR TPAGKGDAIM MEAENLARLR ESQTPLLGGD  360
NPDLHPSDFS GITPKKRDVQ TPNPMLTPSA TPGGTSLTPR IGMTPSRDVN SFSMTPKGTP  420
IRDKLRINEE MDMHDSAKLE LRRQAELKRN LRMGLSGLPE PKNEYEVVVR PEPEDSEDPE  480
EKIEEDMSDR LAREKAAEEA RLQTLLRKRS KVLQRELPRP PSAYVGLIKN SLMRAGEDKS  540
SFVPPTDIEQ ADEMVRKELL SLLEHDNAKY PLSEKEQKKA HKRSANTVPV IEDFEVDELY  600
EAGSFIEEEV QYLCVAMGHQ EETLDDFVEA HKSCLNDLMY FPTRNAYGLS SVAGTVEKLA  660
ALQNEFENVK KKMDDDNKKA QRLEKKIDVL THGYKMRADK LKTQIELTFK QMNTAGTELD  720
CFLALQRQEN MAASFRIKGL WEEVQKQKEV EKTLQKRYGD RVAELERIRQ LMDQFRKVEE  780
IEAKKHSEEL AQKAANQASL MSYETPEPGS EAAKEHDTDH PVGEALENNG FVNGEPVSIS  840
KLETQGIDGE LSNQINEADG NKLMMDGDVG EPVERVEDDA SNNQV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	179	KRRELKAAGIDIRQRKRKRK
2	174	179	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein