PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62023501-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 322aa    MW: 36262.2 Da    PI: 4.8945
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62023501-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.2e-19100150256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +gr++AeIrdp++   r+r +lg+f+taeeAa  +++a+++l+g+
  AUR62023501-RA 100 KYRGVRRRP-WGRYAAEIRDPVK---RARLWLGTFDTAEEAAVIYDKAALRLRGP 150
                     8********.**********755...5**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MRSVIYSEHR SVTTKHLHLS TPSPSPKIVK ISVRDDDATD SSGDEDDGPT CRTRVVKHVS  60
EIRFQITRPV IPAQPVAQVQ PQPRKQRKSG KRVQNENTRK YRGVRRRPWG RYAAEIRDPV  120
KRARLWLGTF DTAEEAAVIY DKAALRLRGP LAQTNFHRPP LPEIGVTSLS DEFEEEDEVC  180
QRLCSPTSVL RCHQGQDDVE ERENRKMKEI GGGATASSST TTTTSSSSCD FVGDRKPEDQ  240
VMSLPVNESC EMELDISWFL NGLFSYDDAS KTILDDYNNV VPDYTSFDHG DLEDFSGDFD  300
FDGPDFLFST TTKCEVDDYL L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-32ERF family protein