PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62023063-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 321aa    MW: 35836.9 Da    PI: 6.502
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62023063-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.85.9e-096361848
                     HTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 18 qlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     + G g+W+ Iar  g+ R++k+c++rw +yl
   AUR62023063-RA  6 RNGQGCWSDIARNAGLQRCGKSCRLRWINYL 36
                     568899***********************97 PP
2Myb_DNA-binding48.22.5e-154285146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     rg+++++E+ l+++++  lG++ W+ Ia++++ gRt++++k++w++
   AUR62023063-RA 42 RGAFSPQEEHLILHLHSVLGNR-WSQIAARLP-GRTDNEIKNFWNS 85
                     89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MNYMLRNGQG CWSDIARNAG LQRCGKSCRL RWINYLRPDL KRGAFSPQEE HLILHLHSVL  60
GNRWSQIAAR LPGRTDNEIK NFWNSTIKKR LKQNNNSNAS SMDDPSLLSN TTDLMTPIHH  120
HNNYVIGQEV MFPSSMNDHA TSHHHQSFMT AAAYNNLCMD SSIMSTSPSS PSMHTAASSI  180
TSVATNQFDN SLPPLLESNG YGITVSMTNF ACLAQQQELV DHQGHFGNFV GCDDQIQVFH  240
DQHFGTQAGI MYSNNNSNII ATTTTTNTTS EMFPMIHRNK NSNEIVISDS ESWGNLKMGE  300
WDSLESLLGD VSFPFLEFQA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12870.16e-59MYB family protein