PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022628-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-YB

Protein Properties

Length: 308aa MW: 34084.1 Da PI: 5.2868

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022628-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	143.5	5.2e-45	121	213	2	94
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 reqd+++ ian++ri+++vlP+nak+++ ake++qecvsefisf+tsea+++cq+e+rkti+++d++ a++ lG+++yve+l++yl+kyre e AUR62022628-RA 121 REQDHYMSIANLVRIIRRVLPSNAKVADGAKEMLQECVSEFISFITSEANERCQQEHRKTITAEDVIVAMSRLGLDHYVEQLSIYLQKYRENE 213 89****************************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MQEDNSNNQQ MPSNAKPLLF SSFLENLNNS QQNVEENWSP DQHMDPTNAP HFVAPLGTMP 60 LIGDIGGLDI RMTNSIQSSM LNHTEHNHQI QGNICNNMNP DLHTYHVTKI PKFKAPVPPF 120 REQDHYMSIA NLVRIIRRVL PSNAKVADGA KEMLQECVSE FISFITSEAN ERCQQEHRKT 180 ITAEDVIVAM SRLGLDHYVE QLSIYLQKYR ENELYPSVPR RGFENIAFPT NVLPSFAGVH 240 PQSAMFSTSS GTGCGPISTS QDLYTYPIGD SIGPSLALGI GGPSESEGVG PSEPPHTDQY 300 FCSPYGH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	7e-42	NF-YB family protein