PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021683-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 247aa    MW: 27386.4 Da    PI: 4.332
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021683-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.91.6e-101444131
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                     +g+WT+eEd +lv +++++G+g+W++++   
   AUR62021683-RA 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNT 44
                     79************************99765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTDGQNLS SQEGLSSNST  60
SSTSSSNNSN KGQWERRLQT DIHMAKQALC EALSIDKPEF LPRTDSIPNP SFNQQSSIYA  120
SSTENIARLL ENWRKPTPKS PQDSTQTTSC NNNNDRDEFK SLLSFXXXXX XXXXXXTTDN  180
NSQVSASVEV FQDESKPMLG LSAAVSEEQV PLSLLEKWLF EEGVINHDHV NLMDMNLDDD  240
TGADLF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.12e-27MYB family protein