PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021604-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 363aa MW: 39370.6 Da PI: 9.2011

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021604-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52	1.3e-16	199	245	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ ErrRRdriN+++ L++l+P+a K +Ka++L +++eY+k+Lq AUR62021604-RA 199 VHNQSERRRRDRINQKMKALQKLVPNA-----SKTDKASMLDEVIEYLKQLQ 245 6***********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MYAYCLFPSR RFVFCISRLP VKDKVAANFE VAELTWENGQ LAMHELGGIF QSPTTTPSKA 60 TWNGGVGRVT DTLESIVHQA TYCNSKQTPN LMTASASHQQ SGIQNMENVG SSVVASSGGK 120 WAENSGHIQT PVGPLPPPPP GLMKKRTRSE SENCAARNTN DHEMSACASA NAENQEEERE 180 TKGETGRSYT TRKGRAAAVH NQSERRRRDR INQKMKALQK LVPNASKTDK ASMLDEVIEY 240 LKQLQAQVQM MTNARFMPQI MMPLGMQQHF HQMSLLARVG MGMGMLDTSS MGAAHPAPQS 300 IPSMIHPTQV GTATSAFVPP AFVVPQMIPA SSQQANPADP RTSSSAPLQD PYSTLLAQAS 360 TP*

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MYAYCLFPSR RFVFCISRLP VKDKVAANFE VAELTWENGQ LAMHELGGIF QSPTTTPSKA  60
TWNGGVGRVT DTLESIVHQA TYCNSKQTPN LMTASASHQQ SGIQNMENVG SSVVASSGGK  120
WAENSGHIQT PVGPLPPPPP GLMKKRTRSE SENCAARNTN DHEMSACASA NAENQEEERE  180
TKGETGRSYT TRKGRAAAVH NQSERRRRDR INQKMKALQK LVPNASKTDK ASMLDEVIEY  240
LKQLQAQVQM MTNARFMPQI MMPLGMQQHF HQMSLLARVG MGMGMLDTSS MGAAHPAPQS  300
IPSMIHPTQV GTATSAFVPP AFVVPQMIPA SSQQANPADP RTSSSAPLQD PYSTLLAQAS  360
TP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	209	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	2e-29	bHLH family protein