PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021466-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

CPP

Protein Properties

Length: 591aa MW: 63856.3 Da PI: 7.9568

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021466-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42.1	1.8e-13	109	148	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g++C+ C+C++C+N+ e+ AUR62021466-RA 109 RQKQCNCKHSRCLKLYCECFASGVYCDG-CNCNNCCNNVEN 148 689***********************.******9875 PP
2	TCR	51	2.8e-16	192	231	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e AUR62021466-RA 192 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCIDCKNFE 231 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MEEGDKGGNS PPKPSMATDI PAKKLARQLD FTSISGASQP PTTSVVQPPS MPSAQPPLPQ 60 PPSQQPMIAP SQQPPPQTPP LPSMRVVKPE SPKARSRPTV ETKDGTPKRQ KQCNCKHSRC 120 LKLYCECFAS GVYCDGCNCN NCCNNVENET ARRDAVEATL ERNPNAFRPK IASSPHGIRD 180 RREDAGDVVV AKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCIDCKNF EGSEERQALF 240 HGEHANNLSY MQQAANAAIT GAIGSSGFTS TPNSRKRKGQ DLLFGPASKD PSLSRVGQFQ 300 QANHVKTSGP SAVSLSPASR AANSVSLGAS KFTYRSLLAD IIQPHDVKEL CSVLVVISQE 360 VAKTIAESNK ANEKRADDGG ENQQASTQDR FQSQEESDVK TVPDGSVSGN QTDRIVPDDS 420 NLDGNDQPKS RPMSPLTLAL RCDEQDTMFM AAGSPSRLGN HVHASSSQCP EQSTSEVYAE 480 QERIVMMKFR DCLNRLITFG ELRETKLSSL ARSNYTSFQE TGNGTAKLRT DGQNQQEHND 540 NGTAKPVITA PTKTPAMIAA TITGVPFNNH TDQNPPPTEN GDVKPSIKKD *

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MEEGDKGGNS PPKPSMATDI PAKKLARQLD FTSISGASQP PTTSVVQPPS MPSAQPPLPQ  60
PPSQQPMIAP SQQPPPQTPP LPSMRVVKPE SPKARSRPTV ETKDGTPKRQ KQCNCKHSRC  120
LKLYCECFAS GVYCDGCNCN NCCNNVENET ARRDAVEATL ERNPNAFRPK IASSPHGIRD  180
RREDAGDVVV AKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCIDCKNF EGSEERQALF  240
HGEHANNLSY MQQAANAAIT GAIGSSGFTS TPNSRKRKGQ DLLFGPASKD PSLSRVGQFQ  300
QANHVKTSGP SAVSLSPASR AANSVSLGAS KFTYRSLLAD IIQPHDVKEL CSVLVVISQE  360
VAKTIAESNK ANEKRADDGG ENQQASTQDR FQSQEESDVK TVPDGSVSGN QTDRIVPDDS  420
NLDGNDQPKS RPMSPLTLAL RCDEQDTMFM AAGSPSRLGN HVHASSSQCP EQSTSEVYAE  480
QERIVMMKFR DCLNRLITFG ELRETKLSSL ARSNYTSFQE TGNGTAKLRT DGQNQQEHND  540
NGTAKPVITA PTKTPAMIAA TITGVPFNNH TDQNPPPTEN GDVKPSIKKD *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	0.0	CPP family protein