PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021216-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 300aa    MW: 33315 Da    PI: 5.3892
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021216-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind82.37.2e-262987260
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
    HSF_DNA-bind  2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60
                    Fl+k+y+++ed+++++++sw+++g+sfvv++++ fa+++Lp+yFkh+nf+SFvRQLn+Y
  AUR62021216-RA 29 FLTKTYQLVEDPSIDDVVSWNDDGSSFVVWNPTVFARDLLPRYFKHNNFSSFVRQLNTY 87
                    9********************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MIPPAIDENV AGSGGGSGGD SQRSIPTPFL TKTYQLVEDP SIDDVVSWND DGSSFVVWNP  60
TVFARDLLPR YFKHNNFSSF VRQLNTYVRI SKSSSRPMGV LKRIVSKRFE TPTLRHPTPE  120
NGVVTVAQRQ VSPGDSGEEQ VISNSPPLGI PSLVYCNNNT STNHNNNCSS SGNSRVELID  180
ENERLRRENQ ELNKELTNMK TLCNNIFSLM NNFATSQGNS SATSSSTNCM KQALDLLPRK  240
ELEGVRDYHD GEGVVHVQDD MMETDIEIKC EPLDGNGVID NQETPWLKQC HRHNQRVCN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.12e-46HSF family protein