PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021138-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 338aa    MW: 36754.9 Da    PI: 6.5357
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021138-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS55.61.1e-17361352108
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++l+ e+A  +++g++e a+ lLarls +++++g++ qRla+y+ +AL+ r     se+++ ++        s+e++ a+  ++++sP++kf+ l
  AUR62021138-RA  36 KQLIAEAAMTIAEGKNEVATDLLARLSRISNSKGSSEQRLAFYMGNALRCRACP--SEISAPVHELY-----SEEQMLAMYSLYDISPCFKFGLL 123
                     688999***********************************************9..66664333333.....6688889999************* PP

            GRAS  97 taNqaIleaveg 108
                     +aN  +lea+ +
  AUR62021138-RA 124 AANLVMLEAITS 135
                     ********9875 PP
2GRAS205.23.7e-63145337183374
            GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                     ++r+++l+ e+L ++ gEa++Vn++++lhr++desvs+e+ rde+L+ vk+l+P+ v++veqe++ n+++F++r+ e++ yy al+dsle++lp+
  AUR62021138-RA 145 TRRITELSRESLGCEDGEAIVVNFAFKLHRVPDESVSMENLRDELLRRVKGLNPRAVTLVEQEMNGNTAPFMTRVNESCAYYGALLDSLESTLPK 239
                     67899****************************************************************************************** PP

            GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsv 370
                     e+++r+ vE+  lgr+ +n +aceg+er+er e ++kWr+r+++aGF+  pls+++a+++++ l+     + g++v+ee+g + +gW++r+L+++
  AUR62021138-RA 240 ENSDRARVEEG-LGRKMSNSIACEGRERVERAEVFGKWRARMGMAGFELKPLSQSVAESMRAKLNSARggNPGFTVKEENGGVGFGWMGRTLTVA 333
                     ***********.****************************************************998877899********************** PP

            GRAS 371 SaWr 374
                     SaWr
  AUR62021138-RA 334 SAWR 337
                     ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MISPSPTSST SSCCSTSAPP LPPQQQPPPA ETLSAKQLIA EAAMTIAEGK NEVATDLLAR  60
LSRISNSKGS SEQRLAFYMG NALRCRACPS EISAPVHELY SEEQMLAMYS LYDISPCFKF  120
GLLAANLVML EAITSALQEG IKGLTRRITE LSRESLGCED GEAIVVNFAF KLHRVPDESV  180
SMENLRDELL RRVKGLNPRA VTLVEQEMNG NTAPFMTRVN ESCAYYGALL DSLESTLPKE  240
NSDRARVEEG LGRKMSNSIA CEGRERVERA EVFGKWRARM GMAGFELKPL SQSVAESMRA  300
KLNSARGGNP GFTVKEENGG VGFGWMGRTL TVASAWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.16e-93GRAS family protein