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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | AUR62021131-RA | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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| Family | NF-X1 | ||||||||
| Protein Properties | Length: 1142aa MW: 124363 Da PI: 8.2302 | ||||||||
| Description | NF-X1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-NF-X1 | 17.5 | 8.8e-06 | 394 | 411 | 1 | 18 |
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18
CG+H C ++CH+GpC++C
AUR62021131-RA 394 CGNHVCAEICHPGPCGEC 411
****************** PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 1142 aa Download sequence |
MSFQAQIDRR DRTRFSGQRQ QTQTQQWVAR GPGILSSPPS NFNVDAGRSD DNVFERQGQV 60 DGRERQGQMD NRERQGQTDN RERQGQMNSR GGRGFRGGGG GRSYMGRPHY LRRERNEPRE 120 GVGERGGAVN KEKSNQKRNV VDSDLPQLVQ EIQEKLSKGI VECMICYDMV RRNAPVWSCS 180 SCYSIFHLNC IKKWARAPTS ADTSAEKLQG YNWRCPGCQA VQQTTSKDIR YICFCGKRHD 240 PPSDLYLTPH SCGEPCGKSL ERELPRADLS KEDMCPHLCV LQCHPGPCPP CKAFAPPRPC 300 PCGKKVITTR CSERKSVYTC GEVCNKILEC GRHHCYQICH VGPCEPCQVP IDSSCFCKKK 360 SEVVICGELS LKGEIRPDDG LYSCSSTCGK KLKCGNHVCA EICHPGPCGE CEFLPSKVKT 420 CYCGKTNLRV RRRSCLDPIP TCLGTCGKLL PCNKHYCKDK CHAGNCSPCS ELVTQKCRCG 480 STSQTVECYK TTLASEKFVC DRQCGRKKNC GRHRCSERCC PLSDSRNTVS GDWNPHFCSM 540 PCGKKLKCGQ HSCEAFCHCG HCPPCMETIF TDLTCACGRT SIPPPLPCGT PPPSCQYPCL 600 VPQPCGHQST HSCHFGNCPP CSVPIAKECV GGHVVLRNIP CGSKDITCNK LCGKTRRCGL 660 HSCSRSCHPA PCDPSCGPSD PTVKGSCGQV CGAPRRDCRH TCQAFCHPTT PCPESRCEFP 720 VTITCSCGRI TAAVPCDAGG SNLGFSAVNV LEASTLQKLP APLQPVEANE KRVPLGQRKL 780 MCDDECAKLV RKRVLADAFD ISQPSLDALH FGENAAVSQV VSELLRRDPK WVLAVEERCK 840 HLVLGKGKGC SGSNIKVHVF CPMLKEKRDA IRIIAERWKL SINAAGWEPK RFIVVHATAK 900 SKAPARIIGP KGSPAVSANH SPVFDPLVDM DPRHVVALLD LPSDADISTL VLRFGGECEL 960 VWLNDKNALA VFSDPARAAT AMRRLDNGSV YQGAAVVQHI GVGATAASAW GGAAASSALK 1020 GNPWKKAVVK ESNSWVEDSW GEEDWSGGSV TADVGPSTSS KGREAPVTST TNRWTVLNPD 1080 SSLSSIESSA RALDFVKRTA AAEPTSEREM KSVPSSSSTV QLMGTPDDNA EVADDWEKAY 1140 E* |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 91 | 99 | GGRGFRGGG |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G10170.1 | 0.0 | NF-X1 family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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