PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020972-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 322aa    MW: 35242.6 Da    PI: 9.2999
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020972-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.15.4e-10650344
                     SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrw 44
                     +WT eE++ + +a++ +  +     W+++a++++ ++t +++k ++
   AUR62020972-RA  6 SWTREEEKAFENAIATHSIDksneEWDKVASMVP-TKTIEEIKQHY 50
                     6******************9**************.**********9 PP
2Myb_DNA-binding40.47e-13104148347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
   AUR62020972-RA 104 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVASHAQKY 148
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MPNLVSWTRE EEKAFENAIA THSIDKSNEE WDKVASMVPT KTIEEIKQHY EFLVEDVGAI  60
EAGKDQRGNS NQGNGYSAFG PSSMGNNTTK ANSKLEQERK KGIPWTEEEH RLFLLGLDKF  120
GKGDWRSISR NFVITRTPTQ VASHAQKYFI RLNSMNRDRR RSSIHDITSV NGGGLSPNQT  180
PITGQQNNTS VAPAVGTAAV AANKHRPPPN VNMAPAGIGM YGTQIGHPVT AAPPPPHHMA  240
SAVGTPASYR SWLINQDLDV IVLQPKLLDQ HLLRGLDIVE TTFEFKFGFR VVASCLYIHP  300
LPPFLHSLGR SGGGRGSSND N*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.16e-60MYB family protein