PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62020962-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 296aa MW: 32526.3 Da PI: 8.3945

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62020962-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.3	3.5e-33	46	100	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl AUR62020962-RA 46 KQRLRWTEDLHNRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 100 79****************************************************8 PP
2	Myb_DNA-binding	59.8	6.1e-19	48	99	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ ++vda++qlGg+ t+k + r mg g+t +++ks++qky+ AUR62020962-RA 48 RLRWTEDLHNRFVDAITQLGGPdraTPKGVLRVMGvPGLTIYHVKSHLQKYR 99 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MYHAKKFSTV SLVPHKTQGS EPVANAGAMG NSSMKSSTPP GGGSGKQRLR WTEDLHNRFV 60 DAITQLGGPD RATPKGVLRV MGVPGLTIYH VKSHLQKYRL AKYLPESPSD GTGSKDEKKV 120 SLDGLANADS SQGLQINEAL KMQMEVQKRL HEQLEVQRQL QMRIEAQGKY LQKIIEEQQK 180 LGSVLRASET LPSSNNEDGE REKSADSQPG REASPSPTSP RKKQKLDDSS TSNIDTLSVP 240 LENSSKKALL DQWDRNLYGS AAGFGLDLET EFYKQENNEC EQRIPSELDY PGSSK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	2e-73	G2-like family protein