PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62020737-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 357aa MW: 40872.2 Da PI: 4.9778

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62020737-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.2	2.4e-17	145	247	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Y+++ +GFs+rk+++++ ++++++ +++fvCs egkr++ +kk ++++ r+ a r +Cka+++ k +k+g++ev + AUR62020737-RA 145 LYEKHVVILGFSIRKHTTRYFTHTEKVSEKNFVCSVEGKRNSCDKKtklvemvdeenvnvKTRKPRQVAIARSNCKACIRAKVNKEGQFEVVAHV 239 688899999*******************************99999*******888888889999********************* PP FAR1 83 leHnHela 90 l+HnHel+ AUR62020737-RA 240 LQHNHELT 247 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MENSSTNFNT SNCSNLIHEF LQKQRQIETP FLGDFENSNS FVEIDLNRSI IEEEEETKSF 60 GDEFVPIFDD NNNPNTGGNQ IDNAEEAIDN AENQMVPRKS IDSNSEQTSK SNATEDANPI 120 DAFGLDLRGS FVGVVRETFE EILELYEKHV VILGFSIRKH TTRYFTHTEK VSEKNFVCSV 180 EGKRNSCDKK TKLVEMVDEE NVNVKTRKPR QVAIARSNCK ACIRAKVNKE GQFEVVAHVL 240 QHNHELTRSQ WHYLHHSERK MTEEKAEAIK TMKSSGLTTM DTYNYMATEA GGEQNVGHSV 300 VDHLNFCSRL RMEQIEAGDA QTLVNILNHE QSEDPNFFFR VKFENEGRIS NIFWRE*

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MENSSTNFNT SNCSNLIHEF LQKQRQIETP FLGDFENSNS FVEIDLNRSI IEEEEETKSF  60
GDEFVPIFDD NNNPNTGGNQ IDNAEEAIDN AENQMVPRKS IDSNSEQTSK SNATEDANPI  120
DAFGLDLRGS FVGVVRETFE EILELYEKHV VILGFSIRKH TTRYFTHTEK VSEKNFVCSV  180
EGKRNSCDKK TKLVEMVDEE NVNVKTRKPR QVAIARSNCK ACIRAKVNKE GQFEVVAHVL  240
QHNHELTRSQ WHYLHHSERK MTEEKAEAIK TMKSSGLTTM DTYNYMATEA GGEQNVGHSV  300
VDHLNFCSRL RMEQIEAGDA QTLVNILNHE QSEDPNFFFR VKFENEGRIS NIFWRE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-22	FAR1 family protein