PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019820-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 362aa    MW: 40319.9 Da    PI: 6.1286
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019820-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.89.3e-28134194259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK++ g+++prsYYrCt++   gC ++k+v+r++edp  +++tY+g+H+++
  AUR62019820-RA 134 EDGYSWRKYGQKDILGAKHPRSYYRCTYRniqGCYATKQVQRNDEDPMQFNVTYKGTHTCT 194
                     7***************************98999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MENGCGNYEQ ESLVVELNQG VALAKQLKAQ MSSEILAGET KGMLAERIHS CLEKALLILR  60
LGGSMEQFHQ HLVPSTTAPE SPLSVIGSPK SEDLNPGIHV QQDSIELSKK RKMMPTWTDQ  120
VRACSENAAE GPPEDGYSWR KYGQKDILGA KHPRSYYRCT YRNIQGCYAT KQVQRNDEDP  180
MQFNVTYKGT HTCTLAPRSK SAPTSPQKQE RNKQSNFPIM HYQQPPDMLL NFQTGLRVDI  240
QSLENQETGF FFPTRDFGYE NHAFTPSTVH NSHPSNSFPQ SFIQSPATSE STYFSTSPCK  300
VSTFGGVNYG QHFESDITEI ISATTSGTNS PIIGIDYSMD PWEGFLSDNQ AFPNSFSQAK  360
E*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-55WRKY family protein