PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019754-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 297aa    MW: 33154 Da    PI: 6.7165
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019754-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.74.8e-28143201259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D++nWrKYG K++kgs++prsYYrC+++ gC ++k+ve+s +dp  + itY +eH h+
  AUR62019754-RA 143 SDKWNWRKYGEKVIKGSPYPRSYYRCSYTgGCLARKQVEQSISDPGSFLITYMEEHSHP 201
                     69***************************9****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MMNEFSLDKA NEWSLQAIIK GDGSVSTTSS NTMNMSPCYD AWFESLLLGL DDNQGGQENT  60
MLIFNEELEP LNHSISSKSP NNIVDSSVLM NFDVYTSSPT REPKEKATGV SYVHAPATIS  120
KRRKNKHKII KVVQQAGADR VESDKWNWRK YGEKVIKGSP YPRSYYRCSY TGGCLARKQV  180
EQSISDPGSF LITYMEEHSH PYPTRRHSQA GRCARRFIRS SPTKVVATSE SQHALVRTIT  240
LESSTKIDRG LVVQGNEDDG SITDYVGEGV CMGNRVHEDD FFAGLDYLEE LKNGSL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.17e-26WRKY family protein