PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62019295-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 314aa MW: 34713.3 Da PI: 6.3376

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62019295-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.1	1.9e-08	5	33	20	48
TTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqkyl 48 G g+W+ +ar g+ R++k+c++rw +yl AUR62019295-RA 5 GHGCWSDVARNAGLQRCGKSCRLRWINYL 33 7789***********************97 PP
2	Myb_DNA-binding	52.4	1.2e-16	39	82	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++ AUR62019295-RA 39 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 82 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MLTNGHGCWS DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEELI IHLHSLLGNR 60 WSQIAARLPG RTDNEIKNFW NSTVKKRMKS SSTSSSPNAS DSSLSTEPRD GMVGGFMAMQ 120 DPCSIMAMYV SNNSASPTSS SMQTMVPLSH HHHGIMDHPL PNMVNHSNNN TTTTTNSLDI 180 YGMLGSHNYN YGLLQGELSI PSLETISIEE NTQVSENIVF GRNTTISNNN NHFDNNSSNN 240 HFDHNHHIIS GTNNTTPLNN SITSSGAKKF EAAVVPSVGN NWEGGDDSRL GEWDLEELMR 300 DVSSFPFIDY QVE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12870.1	1e-42	MYB family protein