PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019107-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 301aa    MW: 32444 Da    PI: 5.2691
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019107-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.71.1e-15148184135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp +Rrgp g++tLCnaCGl+++ kg+
  AUR62019107-RA 148 CQHCGISEndTPAMRRGPAGPRTLCNACGLMWANKGT 184
                     ******999*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MAANPKPLQS RPYEGEVPID GGYSGESDGD DSMEDDGVDE DQTVQAVLLL LGERETHAGV  60
PTTEVAFGQD NRATGSPARK SIISHRIASL VRFREKRKER CFDNKIRMHR KNGQFASLRE  120
GSASSNLEAN KNLVVGRSLG PETVSNKCQH CGISENDTPA MRRGPAGPRT LCNACGLMWA  180
NKGTLRNLSK GRRSFILDQA EPGTPVDSKP SIVEENSLAN PCKLRTPKGD SSAVTIAYVN  240
TFAKPHKELG IIQNSHRIAD ATSMLTEIAA DSSGNFDKED TMADLDDSSE TDVDIPTNSD  300
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-43GATA family protein