PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019007-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ZF-HD
Protein Properties Length: 285aa    MW: 30196 Da    PI: 9.6943
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019007-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.51.5e-3366121359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                      vrY+eClkNhA+++GghavDGCgEfm++ geegt +alkCaAC+CHRnFHR+e++ 
  AUR62019007-RA  66 VVRYRECLKNHAVNIGGHAVDGCGEFMAA-GEEGTLDALKCAACNCHRNFHRKETDI 121
                     689*************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MTHVHVVLSH VVPPPYFSNN INIAKAAAVV VPPSYDPIGG SGGNSAPSRP RVSSASGGGG  60
ERRSVVVRYR ECLKNHAVNI GGHAVDGCGE FMAAGEEGTL DALKCAACNC HRNFHRKETD  120
ISGDNITSPN TGPSPAVAPP APAGTMYPQF SGYYRTPPPP GSGYHHHYRP LAVLPSTSGG  180
THSGDMGDDM SHPSSSGGEG RRESGSGGVG GGGSAMMMVP KKRHRTKFSQ EQKDKMLAFA  240
EKLGWRIQKH DETAVQQFCA EVQVKRQVLK VWMHNNKHTL GKKP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.13e-48ZF-HD family protein