PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62018932-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 629aa MW: 71147.8 Da PI: 8.4888 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.4 | 7.7e-09 | 571 | 617 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 W+ + lv+a k ++++ +W+++a ++ g+t +qck ++ ++ AUR62018932-RA 571 VWSSVQERALVQALKTFPKEtpqRWERVATAVP-GKTMNQCKKKFASL 617 7********************************.*********99765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 629 aa Download sequence |
MMAQQVSNVR LISYLQELED GKPLYVSSNC LPLKVSKYEP AGHSFHAVAL RLSGHCVEVS 60 DKDDDQSASN DKEQTFTPSF ESYSGKSKKK SGGDGKQQQD HYALLGLAHL RYLATEEQIR 120 KSYRDVALKY HPDKQAALLL QEETEASKLA KKDEIENHFK AIQEAYELLI DPQKRRMYDS 180 TDEFDDEIPT DCAPQDFFKV FGPAFMRNSR WSVHQPAPSL GDENSSFDEV DKFYNFWYSF 240 KSWREFPHAD EFDLEQAESR DHKRWMERQN AKLSEKARKE EYTRVRSLVD NAYKRDPRIA 300 KRKEFEKAEK KRKKEAKFLA KKLEEEEAAR IAEEEKRKKE EEDKKAAEAA LLNKKAKEKE 360 KKLLRKERTR LRSLTAEVAS DRVFDISGDD VETLCMSLDM LRLRGLCDKI EGKEKEEQVK 420 FIKNSLNGQV DDEKSPSSSP NPKPKQTGAV EANGSMNSSR TSRRWEVISE YIGTGRSVEE 480 ILKATKSVLL QKPDSSKAFD SFLEKRKPAA TISSPLSTRE EVQGVPIVNG TNTGSAPGAD 540 ASSSTTPTDT PNAPSSTDSP AASSGLSDPD VWSSVQERAL VQALKTFPKE TPQRWERVAT 600 AVPGKTMNQC KKKFASLKET FRSKKTTG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 310 | 314 | KKRKK |
2 | 310 | 338 | KKRKKEAKFLAKKLEEEEAARIAEEEKRK |
3 | 311 | 339 | KKRKKEAKFLAKKLEEEEAARIAEEEKRK |
4 | 336 | 359 | KRKKEEEDKKAAEAALLNKKAKEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11450.1 | 0.0 | MYB family protein |