PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018880-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 181aa    MW: 20638.2 Da    PI: 9.5545
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018880-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.64.9e-2164114255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+++g   r++lg+++ta eAa+a+++a+ kl+g
  AUR62018880-RA  64 HYRGVRRRP-WGKYAAEIRDPNKRG--SRVWLGTYDTAIEAARAYDRAAFKLRG 114
                     7********.**********96655..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MSTPSPTFSG GSKSKFREKR PAMNIAVPAP AKKFEVVEFV PEMTQQASDV VTQQKVEKEE  60
AQRHYRGVRR RPWGKYAAEI RDPNKRGSRV WLGTYDTAIE AARAYDRAAF KLRGSKAILN  120
FPLEVGKEDH TIYDPNRKAA MDFVRQEITN QIWESVRRNV EVMEELGGQK GDEELTDYEN  180
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.12e-33ERF family protein