PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018879-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 271aa    MW: 29279.7 Da    PI: 7.975
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018879-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.15.9e-20136186255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  AUR62018879-RA 136 HYRGVRRRP-WGKYAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAFRMRG 186
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MNRISHLETD LAVLDSIRRH LLEDWDPRIV GASTINNGSN PVYCRNSSFS RLYPCLTENW  60
GELPLKEDDS EDMVLFGVLR DAVHTGWSPE SGSEIDSGSP APVVVKSESV ESPVSVTGGV  120
VPAVAVAMAA PTRGKHYRGV RRRPWGKYAA EIRDPAKNGA RVWLGTFETA EDAALAYDRA  180
AFRMRGSKAL LNFPLRVNSG EPDPVRITSK RSSPERTTSS LSTSSSSSSE SGPLKRRKKE  240
NGQVGKGVEA LQQVGCQVHS DEQCALQSSA *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.14e-68ERF family protein