PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018853-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

GATA

Protein Properties

Length: 623aa MW: 69424.7 Da PI: 5.7915

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018853-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	34.1	3.8e-11	90	116	9	35
GATA 9 TplWRrgpdgnktLCnaCGlyyrkkgl 35 TplWR+gp ++ LCnaCG ++r kg+ AUR62018853-RA 90 TPLWRNGPPEKPVLCNACGSRWRTKGT 116 9*****88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MEVSTLMYGL LLQDFWLLTS ASSYSTSPHL IFDSTNSLSP EHILVIETLS RFLFPIEVSC 60 LTILLTRSAA FWSNAFSSFC KLYAMPDNCT PLWRNGPPEK PVLCNACGSR WRTKGTLANY 120 TPLHSRVDPD EYEDHRVGRV KTMSLKKRDD KISKRKYNYE NSIDGDFIPD YSQGFQKNID 180 EDTSNRSSSG SAISNSESCA QFGSAEASEL TGPAQSIVWD ALVPSRKRTC VTRAKQSSVE 240 KLTKDLYTIL HEQQASHPSV SSEDDLLYES EAPMVSVEIG HGSVLIRHPS SIARDEESEA 300 SSLSVENKLC RTDEGYSNPA SMLLFNDSKS VGSSCLGVEK VKRLNGHILQ LEQVKREKYN 360 NESIQLLWNH DSLLCDIDLT EIVNPDVFRG HLTDKEQQDL LKYLPTVDTS SVSDSLGSIF 420 TSTHFKENIS SFQKLLADGV FDTSFSGIQT EDCKVLKRLA LSNMTKCNWV EYRNSLKDKR 480 TKESTGESVR ISEAKSCFSG NFANAKRSRE SQTHRWPETN GATKIPKRVL LKVDCKSKQP 540 LQYEGSCLTP APKNLFTFPT NGSSLMLDSY QFEDESSDQD LLLDVPSNGS YPQAEAELLC 600 PTSSFASQQA SSSSIPISHF RP*

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MEVSTLMYGL LLQDFWLLTS ASSYSTSPHL IFDSTNSLSP EHILVIETLS RFLFPIEVSC  60
LTILLTRSAA FWSNAFSSFC KLYAMPDNCT PLWRNGPPEK PVLCNACGSR WRTKGTLANY  120
TPLHSRVDPD EYEDHRVGRV KTMSLKKRDD KISKRKYNYE NSIDGDFIPD YSQGFQKNID  180
EDTSNRSSSG SAISNSESCA QFGSAEASEL TGPAQSIVWD ALVPSRKRTC VTRAKQSSVE  240
KLTKDLYTIL HEQQASHPSV SSEDDLLYES EAPMVSVEIG HGSVLIRHPS SIARDEESEA  300
SSLSVENKLC RTDEGYSNPA SMLLFNDSKS VGSSCLGVEK VKRLNGHILQ LEQVKREKYN  360
NESIQLLWNH DSLLCDIDLT EIVNPDVFRG HLTDKEQQDL LKYLPTVDTS SVSDSLGSIF  420
TSTHFKENIS SFQKLLADGV FDTSFSGIQT EDCKVLKRLA LSNMTKCNWV EYRNSLKDKR  480
TKESTGESVR ISEAKSCFSG NFANAKRSRE SQTHRWPETN GATKIPKRVL LKVDCKSKQP  540
LQYEGSCLTP APKNLFTFPT NGSSLMLDSY QFEDESSDQD LLLDVPSNGS YPQAEAELLC  600
PTSSFASQQA SSSSIPISHF RP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.2	1e-122	GATA family protein