PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018693-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 245aa    MW: 27541.1 Da    PI: 6.6688
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018693-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.47.7e-191562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEdellv +++++G g+W++ ++  g++R++k+c++rw +yl
   AUR62018693-RA 15 KGPWTPEEDELLVSYIQKHGLGSWRALPKAAGLNRCGKSCRLRWTNYL 62
                     79********************************************97 PP
2Myb_DNA-binding56.94.7e-1868113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg +T+eE++ +++++  lG++ W++Ia++++ gRt++++k++w+++l
   AUR62018693-RA  68 RGCFTEEEEDMIIKLHSVLGNK-WSRIAAHLP-GRTDNEIKNYWNTHL 113
                      899*******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGRAPCCDDI SELKKGPWTP EEDELLVSYI QKHGLGSWRA LPKAAGLNRC GKSCRLRWTN  60
YLRPDIKRGC FTEEEEDMII KLHSVLGNKW SRIAAHLPGR TDNEIKNYWN THLRKKLLQM  120
GIDPVTHKPR NDLNLLANLS QLLSTTQNLG PMMNPWDINN ALRIQPNAAA ESLSSTTTYE  180
TLDENKLPSL VNISPEVSTV NQIESNTNST NGFSALGPTT DGFFEGWDKL LDDGNSDFWK  240
QFIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02940.12e-78MYB family protein