PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018627-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 442aa MW: 47377.7 Da PI: 6.1468

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018627-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.1	4.3e-09	300	326	1	27
XXXXCHHHCHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkae 27 e+elkr+rrkq+NRe+ArrsR+RK+a+ AUR62018627-RA 300 ERELKRQRRKQSNRESARRSRLRKQAR 326 89***********************98 PP
2	bZIP_1	25.4	3.2e-08	367	405	25	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +ae++eL+++++ L++eN L++el++++ +++l +e+ AUR62018627-RA 367 QAECDELAQRAEGLKEENANLRSELNRIRSDYEQLLAEN 405 79*********************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MGESETDKPA KEPKTPVAVS SQEQTSATST AAVNPEWSGF QAYSPIPPPP GFLASSPQAH 60 PYMWGVQHMM PPYGTPPHPY MAMYPHGGLY AHPSMPPGSY PFSPFAMPSP NGVAEAPGNT 120 PASVEVDGKH TEGKEKLPIK RSKGSLGSLN MITGKNNEEG KSTGPAGNGA CSKSAESASD 180 GSSEGSDANS QNDSGERQEA QEADAPQSGI SSVAAQNGVL NAPHTMVNHA LAMVPMTAPG 240 APAPVPGPAT NLNIGMDYWG AASSPVPAMR GKVPSAPVAT GIVPAGSRDN LQSQLWLQDE 300 RELKRQRRKQ SNRESARRSR LRKQARALLI IFYSEMGKWP SFFHDGYNGF KSYNIVPFFL 360 FLEIGIQAEC DELAQRAEGL KEENANLRSE LNRIRSDYEQ LLAENTALKE RLGENPEDLG 420 SNRAEHHMIS ETKESSKTDQ V*

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MGESETDKPA KEPKTPVAVS SQEQTSATST AAVNPEWSGF QAYSPIPPPP GFLASSPQAH  60
PYMWGVQHMM PPYGTPPHPY MAMYPHGGLY AHPSMPPGSY PFSPFAMPSP NGVAEAPGNT  120
PASVEVDGKH TEGKEKLPIK RSKGSLGSLN MITGKNNEEG KSTGPAGNGA CSKSAESASD  180
GSSEGSDANS QNDSGERQEA QEADAPQSGI SSVAAQNGVL NAPHTMVNHA LAMVPMTAPG  240
APAPVPGPAT NLNIGMDYWG AASSPVPAMR GKVPSAPVAT GIVPAGSRDN LQSQLWLQDE  300
RELKRQRRKQ SNRESARRSR LRKQARALLI IFYSEMGKWP SFFHDGYNGF KSYNIVPFFL  360
FLEIGIQAEC DELAQRAEGL KEENANLRSE LNRIRSDYEQ LLAENTALKE RLGENPEDLG  420
SNRAEHHMIS ETKESSKTDQ V*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	317	323	RRSRLRK
2	317	324	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-130	bZIP family protein