PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018592-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 442aa    MW: 49514.4 Da    PI: 7.0014
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018592-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-19254304256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+ge
  AUR62018592-RA 254 LYRGVRQRH-WGKWVAEIRLPRN---RARVWLGTFDTAEEAAFAYDTAAYMLRGE 304
                     59******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MEDHCSELET FMQQRKMPPH FPVEDVSKSF SNTHLWDDSF HDHNNGSDDG RIEFRSLPFF  60
DRLTSTRLLE PSSSTSDLSR QYMIPEHNNK TTTTFTQQGS ALDFTFPRAS TFVNFFKSSA  120
SADKLTQSRL PQTSSEPSHS VSAAHINLSD LTLFSKEAKI MDPSLSRVET VGSSSQDALL  180
SDPLLQCGQS QYLPAGHNRW LRMSEDFSSN VVSTEFRLSP TKTQAMKKST GRRLQALLHP  240
HKSXXXXXXX XGKLYRGVRQ RHWGKWVAEI RLPRNRARVW LGTFDTAEEA AFAYDTAAYM  300
LRGEYAHLNF PDQKHLLKAN SLNGETAALL EAKIQAISQQ GGLKKSVDLL PASSLLMNNL  360
ADPNSISSSR TAGQLSVRKE WQFELDGRVL GTSEMIDSNK MMRSHEASCD HSVDTHGVQL  420
SKMPSLDMDS IWDALLISDT T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.13e-41ERF family protein