PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018493-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 132aa    MW: 14841.2 Da    PI: 3.8876
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018493-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.78.5e-111442129
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIar 29
                     +g+WT+eEd +lv +++++G+g+W++++ 
   AUR62018493-RA 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPT 42
                     79************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MGRPPCCDKD GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTEDEQFE SMLSFDNLNS  60
DNKVGMVTTT TCDDSTEEDS NEGVKLHENM DYIDDDDGNN PPLTFLEKWL LDESTTSRQV  120
AQEILRLPSI F*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.11e-27MYB family protein