PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018457-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 294aa MW: 32527.5 Da PI: 9.1647

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018457-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.3	3.5e-33	45	99	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl AUR62018457-RA 45 KQRLRWTEDLHNRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 99 79****************************************************8 PP
2	Myb_DNA-binding	59.8	6.1e-19	47	98	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ ++vda++qlGg+ t+k + r mg g+t +++ks++qky+ AUR62018457-RA 47 RLRWTEDLHNRFVDAITQLGGPdraTPKGVLRVMGvPGLTIYHVKSHLQKYR 98 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MYHAKKFSTV SLVPHKTQGS EPVANAGAMG NSSMKSSTPP GGSGKQRLRW TEDLHNRFVD 60 AITQLGGPDR ATPKGVLRVM GVPGLTIYHV KSHLQKYRLA KYLPESPRDG TGSKDEKKVS 120 LDGLANADSS QGLQINEALK MQMEVQKRLH EQLEVQRQLQ MRIEAQGKYL QKIIEEQQKL 180 GSVLRASETL PSSNNQEEER EKLADSQPGR EASPGPTSPR KKQKLDYSSS NIDTLSVPLE 240 NSPKKALLDQ WDRNLYGSAA GFGLDLETEF NKQENNECEQ RIPSELDYPG SSK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	3e-72	G2-like family protein