PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017823-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 367aa MW: 40935.6 Da PI: 4.775

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017823-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	36.4	9.2e-12	35	111	1	83
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f+k++++s+ + +l lp+kf++eh + ++ t++l de g+ ++ + ++g+ l++GW++F ++L egD+++ AUR62017823-RA 35 FLKTMLKSHITGGFWLGLPRKFCDEHLPI--RDCTVVLVDEAGKGFDTVY--LAGKGG--LSGGWRGFSIYHELLEGDVLIYI 111 89**********************645..5569***********..777777..9****************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
QRMDLSVPLS MDDKSSSMKR AEEVQANLSA ESPSFLKTML KSHITGGFWL GLPRKFCDEH 60 LPIRDCTVVL VDEAGKGFDT VYLAGKGGLS GGWRGFSIYH ELLEGDVLIY IIREQSFGEV 120 DGALGLLTLD SRVGEQKSEG HTEMVQTEDN YTAVDHLSLS SSDVDLGSEV LDGIRLSDSS 180 IKFEGVSDLK NFNIIVDGLI LDSKFNDSTR KKYYELCCNQ RSFLHERFLK GLNCHLVVGI 240 ISETVNIADA IRSYEEAPTS HEDLQSWEKT LRGFELLGMK VEFLLASVNK LLGHSVESEV 300 VNVPNMLKES IIKRALAGER MKALENKLRQ LKESLEKIDF EMDMEIAMAS SWKKESKVEE 360 IPAAVW*

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

QRMDLSVPLS MDDKSSSMKR AEEVQANLSA ESPSFLKTML KSHITGGFWL GLPRKFCDEH  60
LPIRDCTVVL VDEAGKGFDT VYLAGKGGLS GGWRGFSIYH ELLEGDVLIY IIREQSFGEV  120
DGALGLLTLD SRVGEQKSEG HTEMVQTEDN YTAVDHLSLS SSDVDLGSEV LDGIRLSDSS  180
IKFEGVSDLK NFNIIVDGLI LDSKFNDSTR KKYYELCCNQ RSFLHERFLK GLNCHLVVGI  240
ISETVNIADA IRSYEEAPTS HEDLQSWEKT LRGFELLGMK VEFLLASVNK LLGHSVESEV  300
VNVPNMLKES IIKRALAGER MKALENKLRQ LKESLEKIDF EMDMEIAMAS SWKKESKVEE  360
IPAAVW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	1e-32	B3 family protein