PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017523-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 435aa MW: 49632.2 Da PI: 6.6336

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017523-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.6	4.7e-13	194	281	1	86
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EE.EEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsW.evkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+ v+ +++v+++ rl++p ++++e+ ++ ++ +l+l+ + ++W +++l++ k+ + v ++GW +Fv++n+L gD +vF+l++ AUR62017523-RA 194 FKVVMHHNNVSNQYRLSFPINHVRENlTIV-SKKLKLILKRSVDEKWyNLRLNVyAKNNLAQVGSAGWGNFVRDNELHIGDACVFELVD 281 6667788889999***********7444.4455777777555555378884447777779999*******************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MISVMERLEA FKSQNPHFKA IMRPTYVSKL YRMKVEFLKK GSFSPAELEA LVSIMQIAER 60 SSSTGTPSIS KSITSLEAMG VRVFGLDEPL VGNAKEEVSW DTIAGYDQQK RYDEANFEFC 120 VTIFNMSGCE IDYDQVFQNR IIDLAQQVQE ISSCDNDDDL SLEAKDIHII DETETETTSV 180 MHNIEAFEPQ KPHFKVVMHH NNVSNQYRLS FPINHVRENL TIVSKKLKLI LKRSVDEKWY 240 NLRLNVYAKN NLAQVGSAGW GNFVRDNELH IGDACVFELV DPRTAMYKRN YEKEEKIEEN 300 DVSVEIIDEI KPNLNDVASV ASLDDTLDST HSSTDDEASS SFKSKGYDYI SPNLKKKLTR 360 KLDGITSQHP HFKRIMYPSN VRDQKKLRVP LEHASTYFPR KSKEIILKGP NGKSHHVRFY 420 TGKACVEIIG GWRS*

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MISVMERLEA FKSQNPHFKA IMRPTYVSKL YRMKVEFLKK GSFSPAELEA LVSIMQIAER  60
SSSTGTPSIS KSITSLEAMG VRVFGLDEPL VGNAKEEVSW DTIAGYDQQK RYDEANFEFC  120
VTIFNMSGCE IDYDQVFQNR IIDLAQQVQE ISSCDNDDDL SLEAKDIHII DETETETTSV  180
MHNIEAFEPQ KPHFKVVMHH NNVSNQYRLS FPINHVRENL TIVSKKLKLI LKRSVDEKWY  240
NLRLNVYAKN NLAQVGSAGW GNFVRDNELH IGDACVFELV DPRTAMYKRN YEKEEKIEEN  300
DVSVEIIDEI KPNLNDVASV ASLDDTLDST HSSTDDEASS SFKSKGYDYI SPNLKKKLTR  360
KLDGITSQHP HFKRIMYPSN VRDQKKLRVP LEHASTYFPR KSKEIILKGP NGKSHHVRFY  420
TGKACVEIIG GWRS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	3e-07	B3 family protein