PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017519-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 542aa    MW: 60293.8 Da    PI: 6.5649
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017519-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS445.82.9e-1361705392374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++L++cA+av ++d+  aq+l+ +l++++s +g+p+qRl ay++e+L ar a+s+s++ykal+++e +   s++ l++l++++ev+P++kf+++
  AUR62017519-RA 170 KQVLVACARAVVENDQLVAQWLMDELRQMVSVSGSPIQRLGAYMLEGLVARQASSGSSIYKALKSKEPA---SADLLSYLHILFEVCPYIKFGYM 261
                     689*****************************************************************9...9********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                      aN aI ea+++e+rvHiiDf+i+qG+QW++Llqa+a+Rp+g+p++R+Tg++++ s   +   l+ +g+rL+++A++++vpfef++ v  +   +
  AUR62017519-RA 262 SANGAIAEAMKNERRVHIIDFQIGQGTQWVTLLQAFAARPGGAPHIRVTGIDDSYSAyaRGGGLNIVGQRLSRLAQAFKVPFEFHA-VDISGCRV 355
                     *****************************************************877788999************************.5668999* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +l++L +++gEalaVn++++lh+++desvs+e++rd++L+lvk+l+Pkvv++veqe+++n++ Fl rfle+l+yy+a+f+s++++lpr +++ri+
  AUR62017519-RA 356 QLKDLGIQRGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKGLNPKVVTLVEQECNTNTAAFLPRFLETLDYYMAMFESMDVTLPRVHKDRIN 450
                     *********************************************************************************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vE+++l+r++vn++acegaer+erhe l+kWr+r+++aGFkp+pls  +++++k+llr++ ++ yr+ee++g+l+lgW++r Lv+ +aW+
  AUR62017519-RA 451 VEQHCLARDVVNLIACEGAERVERHELLGKWRSRFTMAGFKPYPLSVLVNSTIKTLLRNYCDR-YRLEERDGALYLGWMNRDLVASCAWQ 539
                     *************************************************************66.*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    
MSNSLYYQPK REVDTHFMLQ CQPLNPQLYS NLNTESYATS KTSPGQYNTL ESSSGIGSYM  60
MLSSASTLTF ASSGSPGSLL DSSSYPPDQH CSPDYANNSP VTPVSNSCVT DDCSDLKWKL  120
RELENVMLGP DTTDITDGYS NMIKSGSHVT PLEMDSWGKV IEMLACKDVK QVLVACARAV  180
VENDQLVAQW LMDELRQMVS VSGSPIQRLG AYMLEGLVAR QASSGSSIYK ALKSKEPASA  240
DLLSYLHILF EVCPYIKFGY MSANGAIAEA MKNERRVHII DFQIGQGTQW VTLLQAFAAR  300
PGGAPHIRVT GIDDSYSAYA RGGGLNIVGQ RLSRLAQAFK VPFEFHAVDI SGCRVQLKDL  360
GIQRGEALAV NFAFMLHHMP DESVSTENHR DRLLRLVKGL NPKVVTLVEQ ECNTNTAAFL  420
PRFLETLDYY MAMFESMDVT LPRVHKDRIN VEQHCLARDV VNLIACEGAE RVERHELLGK  480
WRSRFTMAGF KPYPLSVLVN STIKTLLRNY CDRYRLEERD GALYLGWMNR DLVASCAWQC  540
S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein