PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016928-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 432aa    MW: 48202.9 Da    PI: 10.1404
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016928-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.8e-081045238
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlk 38
                      rW t+E+++l  av ++G+++W+++a++++ +R+l+
   AUR62016928-RA 10 VRWGTWEELILGGAVLRHGSHNWDAVASELQ-TRSLY 45
                     69*****************************.**987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MVEERGDNTV RWGTWEELIL GGAVLRHGSH NWDAVASELQ TRSLYPYFFT PKVCKAKYKV  60
LQECYSDCSA WFEELRKKRV NELSRELEKS EESIGSLETK LETLKSEKAV CSYADQGCSA  120
AESSEPLVKS GENESFGKEV SRDGSSAGSF TQETRENSLP QCQAAATETS VEKRERKPVV  180
LEPSIRLEKF PANKKVTKGN VQPALSPDAN VQNPCTSEQG MDEFVKILDS IMENEHASVF  240
RRRLDSQKRA RYKRIIGQHM DLDTIRSRIA NKSITSIIEL LRDLLLLANN ALVFYSKCTR  300
EYNYALVFRD LVTKTLHQHY KVTGNKFGAA ETPKTPMHKP PAKPRRDRPF NSKILNQPVM  360
AVNNAQGTST VVARKVSGQP PGIVGSPSSA ESAALTKKIQ GKRGKVGRVR RGNAGIQAET  420
PMKVRKRARV K*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42150.16e-21MYB_related family protein