PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016814-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 325aa    MW: 35882.4 Da    PI: 8.9735
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016814-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.35.8e-20243276134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+C++tkTp+WR gp+g+ktLCnaCG+++++ +
  AUR62016814-RA 243 CSHCQVTKTPQWRAGPNGSKTLCNACGVRFKSGR 276
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MECMKARALK SNFSSETAMK NNNPPNFFDD FWRISGLPTE DFSIDEFFDL PNEDNVNGSS  60
LLEEEEEKDS SSFSRSSHDP VDHSNSNFSP SLAIPVDDVQ ELELWSHLMD DSIPSPTLAC  120
PKPSSENRKT KPGFTFMNRV EPVSKPGLTR VSCIASPSLV PVKPRSKRAR TTVNRTWTFS  180
SSPKTDSASS CSSTSSPVST LLFPPPVQYM GLLYNNKRSM KKAKKKPSLA SSEGENPLVQ  240
RKCSHCQVTK TPQWRAGPNG SKTLCNACGV RFKSGRLFPE YRPACSPTFS SEVHSNSHRK  300
VLEMRKKKES TEAVTGLAQT VLSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.21e-40GATA family protein