PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62016750-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 418aa MW: 46084.3 Da PI: 5.5428

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62016750-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.8	5.4e-10	226	273	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq AUR62016750-RA 226 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 273 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MNRALPEMLH CLNTPANIIG GKGMEMSVLE RQRMVLKWQQ EQLFQVQPTQ QLSCFNDLSM 60 LSFFPAEAQD FQGADMTYCP SSVTTGPTLN ELLNRPIKAD PGADNGWMDF GMQTSGMTVG 120 SMGIETAGEV HNNPGYETNY GIPRTASCPP SVAEAAATSL KAARDAKGRE SLLSEQKLSG 180 AVGRESFKKR KAERNPRCTS KDSKASEVQK PDYIHVRARR GQATDSHSLA ERVRREKISE 240 RMKYLQDLVP GCNKITGKAG MLDEIINYVQ SLQRQVEFLS MKLAAVNPRL DINIDELISK 300 EVFASCSASL PTMGVSPDLT NPSYLQYNPV EQMDPICGST VVGNPIDLGL RRSISAPVPV 360 PETFLDTSCF NQIPNSLQWD AELQNIYNME FQQGRSTSFP LQTFTGTIES SSLKMEM*

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MNRALPEMLH CLNTPANIIG GKGMEMSVLE RQRMVLKWQQ EQLFQVQPTQ QLSCFNDLSM  60
LSFFPAEAQD FQGADMTYCP SSVTTGPTLN ELLNRPIKAD PGADNGWMDF GMQTSGMTVG  120
SMGIETAGEV HNNPGYETNY GIPRTASCPP SVAEAAATSL KAARDAKGRE SLLSEQKLSG  180
AVGRESFKKR KAERNPRCTS KDSKASEVQK PDYIHVRARR GQATDSHSLA ERVRREKISE  240
RMKYLQDLVP GCNKITGKAG MLDEIINYVQ SLQRQVEFLS MKLAAVNPRL DINIDELISK  300
EVFASCSASL PTMGVSPDLT NPSYLQYNPV EQMDPICGST VVGNPIDLGL RRSISAPVPV  360
PETFLDTSCF NQIPNSLQWD AELQNIYNME FQQGRSTSFP LQTFTGTIES SSLKMEM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	6e-59	bHLH family protein