PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62016671-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 278aa    MW: 31448.2 Da    PI: 10.1526
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62016671-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix57.43.7e-1843127182
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                     +Wt +e+ aLi+a+r+++ +lrrg+l++++W++v++ +     +    ++++qC++k+e+l+kry+ + +++k+  + ++++++ f
  AUR62016671-RA  43 CWTPDETSALIDAYRDKWYSLRRGNLRAAHWQDVADTIhrlcPHVSPPKTSVQCRHKMEKLRKRYRSELQRAKSI-PHHRKNYAGF 127
                     8************************************944444455566779******************99997.7777777666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MASSSPPHQP PPFSDYLDPP LGIPLLLPAP PPPPPSRRLP PPCWTPDETS ALIDAYRDKW  60
YSLRRGNLRA AHWQDVADTI HRLCPHVSPP KTSVQCRHKM EKLRKRYRSE LQRAKSIPHH  120
RKNYAGFQEN SNPNPNPRFG FNSSIQSRCN EFGSPPNQFG ARYLGGSSSG NGLGVMKMIK  180
KKRSALGKKE GRREAGDNVA MAMVEAIRML GEGYVRTEMT KMEMMRDSEK ARMEIEMNRT  240
RMMLEYHQSI VDTFVRGIVV SAPVLDDLDL EWLMLAI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.11e-32Trihelix family protein