PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62016634-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 382aa MW: 42196.9 Da PI: 6.2448

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62016634-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.3	1.4e-32	240	295	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGG+++AtPk+i+elm v+gLt+++vkSHLQkYRl+ AUR62016634-RA 240 KQRRCWSPELHRRFVDALTQLGGPQVATPKQIRELMRVDGLTNDEVKSHLQKYRLH 295 79****************************************************97 PP
2	Myb_DNA-binding	48.8	1.6e-15	242	293	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++vda +qlGg+ t+k I + m g+t ++ks++qky+ AUR62016634-RA 242 RRCWSPELHRRFVDALTQLGGPqvaTPKQIRELMRvDGLTNDEVKSHLQKYR 293 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MGLVCPELSL DLKPSYVSET INGFLSEVSM IGDVSERLNK VDGFVTQLEA ELNKIEVFKR 60 ELPLCMLLLK EVLEEFIPLK KESENTELNK TSEDDSGKDK KNWMSSVQLW NSPHLIRNSN 120 SNQAQNHVSE SPKEDVKQNQ NLGSEIHDLS KIRGGSKGFV PLNHNNNYPT SNFPELTRKV 180 DKEDVSVSGL TLVVPGMINH LEDDSISRVF NPKLGSTRVS NSSPPASIGR PSHQQPSARK 240 QRRCWSPELH RRFVDALTQL GGPQVATPKQ IRELMRVDGL TNDEVKSHLQ KYRLHSRQVP 300 SDSGNKNGQA LSGSWTAQDQ YSESSKPSSS QSASPEGPLQ FPGLTGCTST TGGDSMDDED 360 DDKSESHSWK GHAHKTGKDD V*

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MGLVCPELSL DLKPSYVSET INGFLSEVSM IGDVSERLNK VDGFVTQLEA ELNKIEVFKR  60
ELPLCMLLLK EVLEEFIPLK KESENTELNK TSEDDSGKDK KNWMSSVQLW NSPHLIRNSN  120
SNQAQNHVSE SPKEDVKQNQ NLGSEIHDLS KIRGGSKGFV PLNHNNNYPT SNFPELTRKV  180
DKEDVSVSGL TLVVPGMINH LEDDSISRVF NPKLGSTRVS NSSPPASIGR PSHQQPSARK  240
QRRCWSPELH RRFVDALTQL GGPQVATPKQ IRELMRVDGL TNDEVKSHLQ KYRLHSRQVP  300
SDSGNKNGQA LSGSWTAQDQ YSESSKPSSS QSASPEGPLQ FPGLTGCTST TGGDSMDDED  360
DDKSESHSWK GHAHKTGKDD V*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37180.1	5e-51	G2-like family protein