PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62015734-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 688aa MW: 78601.4 Da PI: 7.0264

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62015734-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.9	2.7e-26	79	166	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 kfY+eYAk++GF++++++s++sk+++ +++++f Cs++g + e++ ++r+ ++++t+Cka+++vk++k gkw+++++ +eHnHel p AUR62015734-RA 79 KFYQEYAKSMGFTTSIKNSRRSKKSKDFIDAKFACSRYGVTPESDVG---SSRRCSVKKTDCKASMHVKRNKYGKWVIHEFIKEHNHELLP 166 6**************************************999877...889999******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MDMLTKDSHP GVASSIVDQR GDICHGEGAS GNMVDIVNVV HDQDVGAATS ATSSLLLEGD 60 IDIGPDSDLQ FESHEAAYKF YQEYAKSMGF TTSIKNSRRS KKSKDFIDAK FACSRYGVTP 120 ESDVGSSRRC SVKKTDCKAS MHVKRNKYGK WVIHEFIKEH NHELLPALAY YFRIHRNVKL 180 IEKNNIDILH AVSERTKKMF VDMSRQSASF MNHESLRDAR SSLLDKENLA HVTKRHENFT 240 GKFNECVFKS WTDEQFDLRW WKMVGRFDLQ EDEWIRSLYE DRKKWVPLYL SDIFLAGMSP 300 PHRTDSVYSF FDKYIQRKLT LKEFVKQYGA ILQNRYEEEA IADFDTWHKQ PALKSPSPWE 360 KQMSTIYTHA IFKKFQVEVL GVVGCHPRKE GEDGTSITYR VDDCEKDETF FVAWDETKSQ 420 VSCLCRSFEY RGFLCRHAML VLQICGISRI PSQYILRRWT KDAKTTQLMV VGTERLQTRA 480 QRYVALCKQA IELSEEGSLT QESHNITLRT LVDTLKNCVS VNNMNRSAIE VGDTYCDHDI 540 VEAYHGNIST RTSKKKNAVK KRKVASETEV MLTDAEDNLH QMENLTSDGI SLNNYYGSQQ 600 NVPGVGLVQL NLMEPPHDNY YVDQESIPGL GQLNSIGPNH EGFFGAQQTV HGLGHLDFRS 660 SSSFSYSSQD DHDLRSAQLR GDASRHT*

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MDMLTKDSHP GVASSIVDQR GDICHGEGAS GNMVDIVNVV HDQDVGAATS ATSSLLLEGD  60
IDIGPDSDLQ FESHEAAYKF YQEYAKSMGF TTSIKNSRRS KKSKDFIDAK FACSRYGVTP  120
ESDVGSSRRC SVKKTDCKAS MHVKRNKYGK WVIHEFIKEH NHELLPALAY YFRIHRNVKL  180
IEKNNIDILH AVSERTKKMF VDMSRQSASF MNHESLRDAR SSLLDKENLA HVTKRHENFT  240
GKFNECVFKS WTDEQFDLRW WKMVGRFDLQ EDEWIRSLYE DRKKWVPLYL SDIFLAGMSP  300
PHRTDSVYSF FDKYIQRKLT LKEFVKQYGA ILQNRYEEEA IADFDTWHKQ PALKSPSPWE  360
KQMSTIYTHA IFKKFQVEVL GVVGCHPRKE GEDGTSITYR VDDCEKDETF FVAWDETKSQ  420
VSCLCRSFEY RGFLCRHAML VLQICGISRI PSQYILRRWT KDAKTTQLMV VGTERLQTRA  480
QRYVALCKQA IELSEEGSLT QESHNITLRT LVDTLKNCVS VNNMNRSAIE VGDTYCDHDI  540
VEAYHGNIST RTSKKKNAVK KRKVASETEV MLTDAEDNLH QMENLTSDGI SLNNYYGSQQ  600
NVPGVGLVQL NLMEPPHDNY YVDQESIPGL GQLNSIGPNH EGFFGAQQTV HGLGHLDFRS  660
SSSFSYSSQD DHDLRSAQLR GDASRHT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein