PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62015687-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 500aa MW: 57428 Da PI: 7.0321

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62015687-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.2	1.5e-09	10	55	45	90
FAR1 45 kkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+ ++++ r+ + trt+Cka+l+ k+++dgk++v + +l+HnHel+ AUR62015687-RA 10 KDLKQRKPRQVSITRTNCKASLREKMNDDGKFKVVSHVLQHNHELT 55 3335778889999*******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MVLMVDEDNK DLKQRKPRQV SITRTNCKAS LREKMNDDGK FKVVSHVLQH NHELTRKQWH 60 YLHRSEREVT IEKAEAIKTM KSAGLSTMDT YNYMCTEVNG EENLGHSVVD HLNFCSRLRM 120 EQIEAGDAQT LVNILIEEQK EYSNFYFRVK FDKEGRISNI FWRDAMMLED YKIYGDVLVF 180 DTTYRTNRYN LICAPFVGID NHWKNCMFAC AFIGNEKTES FVWLLETFKK SMENRIPTSI 240 FTDQDQAMAT AIEQEKWCPA LSKDFFSTGI LSSQRSESTN HVVGFRANKS TTLTEFYGIF 300 VRTIKRWRSD EKYNEFTCSK SIAFTSLPLS GMLKHAAQVY TLSLFRDFEE EFGYSMATTI 360 QILGRTEENI ILYKVSLEEK PWSSQQSQEN EKARAFMEEN FKSCMKMVED LLAAEAFTEE 420 VVASDDNSNV AESAQSNNNT ASSSTSTTIP TILDPKRAVT KGRSKREKGA LEKGKKSKQK 480 ALPDPNSEFG SKTPTVRLF*

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MVLMVDEDNK DLKQRKPRQV SITRTNCKAS LREKMNDDGK FKVVSHVLQH NHELTRKQWH  60
YLHRSEREVT IEKAEAIKTM KSAGLSTMDT YNYMCTEVNG EENLGHSVVD HLNFCSRLRM  120
EQIEAGDAQT LVNILIEEQK EYSNFYFRVK FDKEGRISNI FWRDAMMLED YKIYGDVLVF  180
DTTYRTNRYN LICAPFVGID NHWKNCMFAC AFIGNEKTES FVWLLETFKK SMENRIPTSI  240
FTDQDQAMAT AIEQEKWCPA LSKDFFSTGI LSSQRSESTN HVVGFRANKS TTLTEFYGIF  300
VRTIKRWRSD EKYNEFTCSK SIAFTSLPLS GMLKHAAQVY TLSLFRDFEE EFGYSMATTI  360
QILGRTEENI ILYKVSLEEK PWSSQQSQEN EKARAFMEEN FKSCMKMVED LLAAEAFTEE  420
VVASDDNSNV AESAQSNNNT ASSSTSTTIP TILDPKRAVT KGRSKREKGA LEKGKKSKQK  480
ALPDPNSEFG SKTPTVRLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-48	FAR1 family protein