PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62015350-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HB-other
Protein Properties Length: 123aa    MW: 13817.2 Da    PI: 4.5728
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62015350-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox15.33.4e-0578109233
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeL 33 
                     rk+ +++keq   Lee F+++++++ ee  e+
  AUR62015350-RA  78 RKKLRLSKEQSAFLEESFKEHHTLNPEELSEM 109
                     788899*********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MGSSRSTAEK EEEDDQREIN GGGSSSSSDP SRLQLDLLPL SPVPRSIQPP PPLRFPWLTD  60
NWATTSKGSD DEENGSTRKK LRLSKEQSAF LEESFKEHHT LNPEELSEMD RVLVLYRIIY  120
TN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17783TRKKLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.11e-14HD-ZIP family protein