PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62015190-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 292aa MW: 32506.5 Da PI: 4.7612

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62015190-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.2	4.5e-34	18	72	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl AUR62015190-RA 18 KQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 72 79****************************************************8 PP
2	Myb_DNA-binding	63.6	4e-20	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ AUR62015190-RA 20 RLRWTNELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 71 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MDPVNNNSLS NNTSMSSKQR LRWTNELHER FVDAVAQLGG PDRATPKGVL RVMGVQGLTI 60 YHVKSHLQKY RLAKYLPDSL SEGKKADKKE SADMLYGLES SSGMQITEAL KLQMEVQKRL 120 HEQLEACVQR QLQLRIEAQG KYLKKIIEEQ QRLSGTLAEV PGSEDSESIK SDPTTPAPTS 180 ESPLGKYSKD CAVAKTTSLD ESFSSQQEPL TPDSICQDAI MCENLDEERS VKQPCLTNND 240 EAFSNQEMFF TQQILESSMN PSLQQRNLIY AGEPCEPSAL SIGKEDRSEE L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-117	G2-like family protein