PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62014889-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

VOZ

Protein Properties

Length: 485aa MW: 54310.2 Da PI: 5.8663

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62014889-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	436.6	3.2e-134	208	424	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 ppp+aflgpkcalwdc+rpaqgs+w+ dycssfha lalneg+pg+tpvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna+el AUR62014889-RA 208 PPPAAFLGPKCALWDCPRPAQGSDWWLDYCSSFHAILALNEGPPGMTPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPEL 302 89******************************************************************************************* PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm ef+glkrsyymdpqp++++ewhlyeyein++d +alyrlelklv AUR62014889-RA 303 FDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMDEFSGLKRSYYMDPQPLNNYEWHLYEYEINKCDVCALYRLELKLV 397 ******************************************************************************************* PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 d kk+++gk ++d++++lqk++grl+a AUR62014889-RA 398 DRKKTPRGKTANDTVSELQKQMGRLSA 424 ***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MRKGLKRNSC KSASHQLFKD KAKNRVDDLQ MIFSDLQSAR KDSRTLDATV LEEQVYLMLR 60 EWKSELNEPS PASSVQNDSL GTFSSDIYRL LHLCDEEDDA TSPFELPLPK SEPDVQKFQA 120 GDAIGFQEGP EVKPGSLEQN FSPVDQCKGS PGLRSLTTTN MEMANQLDYN QFNLHVDLEH 180 HYLSGYNGVD VSALYAHPIS GFLPNVCPPP AAFLGPKCAL WDCPRPAQGS DWWLDYCSSF 240 HAILALNEGP PGMTPVLRPG GIGLKDGLLF AALSAKAQGK DVGIPECEGA ATAKSPWNAP 300 ELFDLSVLEG ETIREWLFFD KPRRAFESGN RKQRSLPDYS GRGWHESRKQ VMDEFSGLKR 360 SYYMDPQPLN NYEWHLYEYE INKCDVCALY RLELKLVDRK KTPRGKTAND TVSELQKQMG 420 RLSAEFPLDN RRPLKGRAKL NSKDGVGNLR SDPNQLISGD KSFDHGVGPP YGYLVENIGD 480 YYLK*

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MRKGLKRNSC KSASHQLFKD KAKNRVDDLQ MIFSDLQSAR KDSRTLDATV LEEQVYLMLR  60
EWKSELNEPS PASSVQNDSL GTFSSDIYRL LHLCDEEDDA TSPFELPLPK SEPDVQKFQA  120
GDAIGFQEGP EVKPGSLEQN FSPVDQCKGS PGLRSLTTTN MEMANQLDYN QFNLHVDLEH  180
HYLSGYNGVD VSALYAHPIS GFLPNVCPPP AAFLGPKCAL WDCPRPAQGS DWWLDYCSSF  240
HAILALNEGP PGMTPVLRPG GIGLKDGLLF AALSAKAQGK DVGIPECEGA ATAKSPWNAP  300
ELFDLSVLEG ETIREWLFFD KPRRAFESGN RKQRSLPDYS GRGWHESRKQ VMDEFSGLKR  360
SYYMDPQPLN NYEWHLYEYE INKCDVCALY RLELKLVDRK KTPRGKTAND TVSELQKQMG  420
RLSAEFPLDN RRPLKGRAKL NSKDGVGNLR SDPNQLISGD KSFDHGVGPP YGYLVENIGD  480
YYLK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein