PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62013093-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 281aa    MW: 30466.8 Da    PI: 5.9722
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62013093-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.65.2e-091459554
                    HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +  rE++RR r+N+ f eL + l        +K++Ka+iL+ +++ +k+L
  AUR62013093-RA 14 KAGREKQRRCRLNEQFIELGTTLDAE----RPKNDKATILTDTIQLLKDL 59
                    5669*******************987....79***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDSDDPTAVR KLQKAGREKQ RRCRLNEQFI ELGTTLDAER PKNDKATILT DTIQLLKDLT  60
AEVDKLKAEH TALSDESREL TQEKNDLREE KTALKSDIDR LSSQCQQRAG PAYPWVAMDS  120
VLQHPPSYPY PMPMPVPTGA VPMHLSMQPY PFFGNPNPGM YANPCSTFIP YMAPNLPAEQ  180
PSTQDVSPPM QPGRTQVSAG HGVGTSSDKH DGQVNKKDDS SDVPTNLELK TPGSTTDENT  240
SSGNRKKRIA AEGSSLSRCS SHSVQDSSSS SIVGGGKGND *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.11e-76bHLH family protein