PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62013084-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family M-type_MADS
Protein Properties Length: 140aa    MW: 15911.2 Da    PI: 9.6723
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62013084-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF46.74e-1513431343
                    HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
          SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsst 43
                    f +R+ gilKKA+ELS+LC+++v viif+++
  AUR62013084-RA 13 FKQRKDGILKKAFELSTLCEVDVGVIIFGPE 43
                    899**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MGRQRKSKIK KVFKQRKDGI LKKAFELSTL CEVDVGVIIF GPEDASPSIW PKEPEVLHNI  60
VTRYQKTSNE ERRKRATNMY TSRFRNIGSN GNDKKEDNLV TAEVPMYNID NFSAKELMGL  120
YSSIEEKIEA VNASLLELV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1411QRKSKIKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.11e-14M-type_MADS family protein